BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB018H09LP1|AL427399
(972 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1784 1884 0.0
>3x_Contig1784
Length = 28126
Score = 1884 bits (947), Expect = 0.0
Identities = 965/973 (99%), Gaps = 1/973 (0%)
Strand = Plus / Minus
Query: 1 accgtgagcttgggcacaaagtgtgtttaaacaagtacagagcccttggatggcagcaaa 60
||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 5648 accgtaagcttgggcacaaagtgtgtctaaacaagtacagagcccttggatggcagcaaa 5589
Query: 61 cccagtgatactcgctgtcatagatcctagggtaacagctcctaattcattgcttcccaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5588 cccagtgatactcgctgtcatagatcctagggtaacagctcctaattcattgcttcccaa 5529
Query: 121 atgtgaaacggaaaaaattgatgctaaagataaagagttttgtaaaatgaaagtyagtac 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 5528 atgtgaaacggaaaaaattgatgctaaagataaagagttttgtaaaatgaaagtcagtac 5469
Query: 181 aagaggtgatgcattagatgttatcactatggcctctctcttaaatgtggtatttatgtc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5468 aagaggtgatgcattagatgttatcactatggcctctctcttaaatgtggtatttatgtc 5409
Query: 241 tttccctgattcaattgcatcctcccaagtttcaatcacttcttgatcctcgattgatga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5408 tttccctgattcaattgcatcctcccaagtttcaatcacttcttgatcctcgattgatga 5349
Query: 301 tgttggtgcaaaggaagagtttggatcatttgttgaatatgcagcatgattatgaagagc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5348 tgttggtgcaaaggaagagtttggatcatttgttgaatatgcagcatgattatgaagagc 5289
Query: 361 atgattagaattgtacagcttattgtccatcaatagatcccgttcttctcgtattagatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5288 atgattagaattgtacagcttattgtccatcaatagatcccgttcttctcgtattagatt 5229
Query: 421 tttcggtaaggcggaatgaatctcactactatcactgcttcccgttcggcctgtagaacc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5228 tttcggtaaggcggaatgaatctcactactatcactgcttcccgttcggcctgtagaacc 5169
Query: 481 atattcgtgttgtaaagtacgagaattattggttgcgaaaagagaatcctctgaatcttc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5168 atattcgtgttgtaaagtacgagaattattggttgcgaaaagagaatcctctgaatcttc 5109
Query: 541 gctaatatcgtcgtctataaatgcttgagtcttgtctcccgaaatataatcttgaggaga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5108 gctaatatcgtcgtctataaatgcttgagtcttgtctcccgaaatataatcttgaggaga 5049
Query: 601 gaaaagaccgcctttaccattattgttcgagtaaattatggaagatcttctctcctgggt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5048 gaaaagaccgcctttaccattattgttcgagtaaattatggaagatcttctctcctgggt 4989
Query: 661 tgtatgcttgaattgcttagacatttgattttgggtattaaaaaactagagaaaaagggg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4988 tgtatgcttgaattgcttagacatttgattttgggtattaaaaaactagagaaaaagggg 4929
Query: 721 gaaaactcttctcaaggttgtwctggtctctattcggatgagagccaattaagttatgag 780
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 4928 gaaaactcttctcaaggttgtactggtctctattcggatgagagccaattaagttatgag 4869
Query: 781 attttagcgattattagtaagtycaaagtagtttacttcactatgataaaccagagttca 840
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 4868 attttagcgattattagtaagtccaaagtagtttacttcactatgataaaccagagttca 4809
Query: 841 aattaaggtggttcctaaagttggragagtttcttcaaaaaaaaaaattagatcacctac 900
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 4808 aattaaggtggttcctaaagttggaagagtttcttcaaaaaaaaaaattagatcacctac 4749
Query: 901 cgaagtccctttcttaaagatctgtccgcagtggttcaagttcatgtaatgatgagt-am 959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 4748 cgaagtccctttcttaaagatctgtccgcagtggttcaagttcatgtaatgatgagtaac 4689
Query: 960 ttgaccagagaag 972
|||||||||||||
Sbjct: 4688 ttgaccagagaag 4676
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 12,101
Number of Sequences: 1807
Number of extensions: 12101
Number of successful extensions: 64
Number of sequences better than 1.0e-20: 1
length of query: 972
length of database: 10,358,551
effective HSP length: 16
effective length of query: 956
effective length of database: 10,329,639
effective search space: 9875134884
effective search space used: 9875134884
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)